SubtiBank SubtiBank
pksA [2019-09-02 11:32:15]
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pksA [2019-09-02 11:32:15]

transcriptional regulator ([SW|TetR family]), not involved in the regulation of the pks operon!
locus
BSU_17080
pI
6.44
mw
23.59 kDa
protein length
205 aa Sequence Blast
gene length
618 bp Sequence Blast
function
unknown
product
transcriptional regulator ([SW|TetR family])
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.5|Transcription factors/ other]

    • Gene

    Coordinates
    1,781,906 → 1,782,523

    The protein

    Protein family

  • [SW|TetR family]

    • [SW|Domains]

  • HTH tetR-type domain (aa 8-68) (according to UniProt)

    • Structure

  • [PDB|2NX4] (from Rhodococcus sp., 28% identity)

    • Biological materials

    Mutant

  • BKE17080 (Δ[gene|CE5C1631A4D29FC195829FCC7961A687581698D6|pksA]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE17080 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAGCTTTATTGTAACAAG, downstream forward: _UP4_TAAGGCACTAGTGTGAAAAG
  • BKK17080 (Δ[gene|CE5C1631A4D29FC195829FCC7961A687581698D6|pksA]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK17080 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAGCTTTATTGTAACAAG, downstream forward: _UP4_TAAGGCACTAGTGTGAAAAG

    • References

    Reviews

  • 24006471

    • Original publications

  • 24187085